The validation has been performed to test correctness of physical and mathematical principals implemented in the docking program SOL. The validation results in frame of two different protocols are presented below.
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The first protocol concerns the identification of active ligands among a set of inactive ones.
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The second protocol concerns the determination of positioning accuracy of ligands in proteins active sites. This protocol was used for two docking programs: SOL and AutoDock 3.05 for comparison.
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